EaMEAD: Activation Energy Prediction of Cytochrome P450 Mediated Metabolism with Effective Atomic Descriptors
References
Kim, Doo Nam, Kwang-Hwi Cho, Won Seok Oh, Chang Joon Lee, Sung Kwang Lee, Jihoon Jung, and Kyoung Tai No. 2009. “EaMEAD: Activation Energy Prediction of Cytochrome P450 Mediated Metabolism with Effective Atomic Descriptors.” Journal of Chemical Information and Modeling 49 (7): 1643–54. doi:10.1021/ci900011g.
Regioselectivity Model
References
Jihoon Jung, Nam Doo Kim, Su Yeon Kim, Inhee Choi, Kwang-Hwi Cho, Won Seok Oh, Doo Nam Kim, and Kyoung Tai No. 2008. “Regioselectivity Prediction of CYP1A2-Mediated Phase I Metabolism” J. Chem. Inf. Model. 48 (5): 1074–80. doi:10.1021/ci800001m.
MPEOE: Partial atomic charge model
References
No, Kyoung Tai, J. Andrew. Grant, and Harold A. Scheraga. 1990. “Determination of Net Atomic Charges Using a Modified Partial Equalization of Orbital Electronegativity Method. 1. Application to Neutral Molecules as Models for Polypeptides.” The Journal of Physical Chemistry 94 (11): 4732–39. doi:10.1021/j100374a066.
No, Kyoung Tai, J. Andrew Grant, Mu Shik Jhon, and Harold A. Scheraga. 1990. “Determination of Net Atomic Charges Using a Modified Partial Equalization of Orbital Electronegativity Method. 2. Application to Ionic and Aromatic Molecules as Models for Polypeptides.” The Journal of Physical Chemistry 94 (11): 4740–46. doi:10.1021/j100374a067.
Park, Je Myung, Kyoung Tai No, Mu Shik Jhon, and Harold A. Scheraga. 1993. “Determination of Net Atomic Charges Using a Modified Partial Equalization of Orbital Electronegativity Method. III. Application to Halogenated and Aromatic Molecules.” Journal of Computational Chemistry 14 (12): 1482–90. doi:10.1002/jcc.540141210.
Park, Je Myung, Oh Young Kwon, Kyoung Tai No, Mu Shik Jhon, and Harold A. Scheraga. 1995. “Determination of Net Atomic Charges Using a Modified Partial Equalization of Orbital Electronegativity Method. IV. Application to Hypervalent Sulfur- and Phosphorus-Containing Molecules.” Journal of Computational Chemistry 16 (8): 1011–26. doi:10.1002/jcc.540160808.
Suk, Jae Eun, and Kyoung Tai No. 1995. “Determination of Net Atomic Charges Using a Modified Partial Equalization of Orbital Electronegativity Method V. Application to Silicon-Containing Organic Molecules and Zeolites” Bulletin of the Korean Chemical Society 16 (10): 915–23.
CDEAP: Atomic polarizability model
References
No, Kyoung Tai, Kwang Hwi Cho, Mu Shik Jhon, and Harold A. Scheraga. 1993. “An Empirical Method to Calculate Average Molecular Polarizabilities from the Dependence of Effective Atomic Polarizabilities on Net Atomic Charge.” Journal of the American Chemical Society 115 (5): 2005–14. doi:10.1021/ja00058a056.0): 915–23.
Protein Type CYP3A4 CYP1A2 CYP2C9 CYP2D6
Calculation...
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